CDS

Accession Number TCMCG075C08306
gbkey CDS
Protein Id XP_017971606.1
Location join(41153739..41153784,41154048..41154143,41154248..41155365,41155725..41155847,41155931..41156004,41156960..41157023,41157118..41157264,41157400..41157485,41158187..41158256,41159077..41159208,41159540..41159770,41160515..41160619,41160709..41160861,41161453..41161541,41161642..41161722,41161825..41161897)
Gene LOC18610587
GeneID 18610587
Organism Theobroma cacao

Protein

Length 895aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA341501
db_source XM_018116117.1
Definition PREDICTED: DNA repair protein RAD16 isoform X2 [Theobroma cacao]

EGGNOG-MAPPER Annotation

COG_category L
Description SNF2 domain-containing protein helicase domain-containing protein RING finger domain-containing protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K15083        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000109        [VIEW IN EMBL-EBI]
GO:0000166        [VIEW IN EMBL-EBI]
GO:0000720        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003678        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004003        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005524        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006289        [VIEW IN EMBL-EBI]
GO:0006290        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008144        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008270        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017076        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0030554        [VIEW IN EMBL-EBI]
GO:0032392        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0032508        [VIEW IN EMBL-EBI]
GO:0032553        [VIEW IN EMBL-EBI]
GO:0032555        [VIEW IN EMBL-EBI]
GO:0032559        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035639        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046872        [VIEW IN EMBL-EBI]
GO:0046914        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061630        [VIEW IN EMBL-EBI]
GO:0061659        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097367        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901265        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1990391        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCAGCTTCGACCGCGTAAAAGGACCTCCAATCCCGCTAGCAATGAACCCAGTGATAGCTCTGACAAAGCCGATGATTTTATCCAGTTGGACGATCTCTCTGACCAAGAAATCTATGTGCCTTCTTCCGACTCTGATCAAGGAGAAGTGGAGATTTTTGACTTAAATCATAAGCCAATGACAGCCACTGCCGTCTCGCATCTGGCATTTGCTCCTATCACCGTTTCTGATTTTGCCGAGCCTTCAACAAACAGAAGCAATGCAGAACAGCAATCGACCGAGCAAAATGAAGGCGATTATGACTTTTATGTGTCAAGCAGAAAAAAGAGAAATAATGTAAAAAGGAAAAAGAAGAAGGCAAGGTCTGGGCCACTGTTAATGTGGGAAGTTTGGGAACAAGAACACGAAAAATGGATTGATGAGAATTTGACGGCTGATGTTGATTTGGATCAACAGAATGCAGTAATAACTGAGACTTCGGAGGCATCACCTGATTTAATTATTCCTTTGTTGAGGTACCAAAAGGAATGGTTGGCCTGGGCTCTGAAACAGGAAGACTCTGCTACCAAAGGGGGAATCCTTGCAGATGAGATGGGAATGGGGAAGACCATTCAAGCGATAGCGCTTGTCCTTGCCAAACGGGAACTCCTTCGTACAATCGCTGAACCCAATGGATCATCACTAACCCCAAGTTCATCAACAGATTTGCCCATGATTCGAGGCACCCTTGTTATTTGTCCCGTGGTTGCTGTGAGTCAGTGGGTAAGTGAGATTGATCGGTTTACTTCAAGGGGAAGCACCAAGGTGCTGGTTTACCATGGCACCAATAGAGGGAAAAATATTAAACAGTTCTTAGATTATGATTTTGTTATAACAACATATTCTATTGTTGAGGCTGAGTATAGGAAATACATGATGCCTCCTAAGGAGAAATGCCCATACTGTGGGAAGTCATTTTATCAAAAGAAGCTGTCAGTTCACCTGAAATATTATTGTGGGCCTGATGCTGTGAAAACAGAAAAGCAGTCTAAGCAAGAGAGGAAGAAATCGAAATCTGTGTTTAAGTCAGATAGAGAACATACTAGTAATTATGAGACTGATATGAGAAAGGGAGCTGGCAAGAAGAAGTCCAAGCATAATGAGGAAGACAAAGACTTAGACTTTGAGTTTGATGACACTTTTGCAGGCGTAGAACATAGCTTGCCTCAAGGAAAATCACTTCTCCACTCTGTGAAGTGGGAACGCATCATCTTGGATGAGGCTCATTTTGTGAAAGATAGACGTTGTAATACTGCAAAGGCTGTTCTTACTTTGGAGTCCTTATACAAATGGGCTTTGAGTGGCACTCCACTTCAGAACCGTGTTGGAGAACTGTACTCTCTGGTTCGCTTCTTGCAAATAGTTCCATACTCCTATTACTTGTGCAAAGATTGTGACTGCAGAACTCTTGATTATAGTTCTTCAACACAATGTTCGAACTGCCCCCATAATTCTGTGAGGCACTTTTGTTGGTGGAATAAGTATGTGGCTACGCCAATACAACAATGCGGCAATGGTGAGATTGGAAAAAGAGCTATGATATTGCTAAAACACAAAATTTTGAAAAACATTGTCTTAAGACGTACCAAGAAAGGCAGGGCTGCTGATCTGGCTCTTCCTCCAAGAATTGTTTCATTGAGGCGGGATACCATGGATATTAAAGAAACTGACTATTATGAATCCTTGTACAGTGAGAGTCAGGCACAATTTAACACATATGTTCAAGCAGGAACTGTAATGAATAATTATGCTCATATTTTTGACCTCCTCACTCGCTTGCGGCAGGCTGTTGATCATCCTTACCTTGTGGTATATTCGAGTACTGCTTCACAAAGGGCTGGAAGCATAGTAAACAGTGATAAGAATAATGATGAACAAGTATGTGGCATTTGCCATGACCCTACAGAAGAGCCAGTGGTTACTGCATGTGCACATGTCTTTTGCAAGGCTTGTCTGATTGATTTTTCTGCCTCCTTGGGACAAGTCTCATGCCCATCGTGCTCAAGATTACTCACTGTTGATCTGACCACAAAAGCAGATGCTGGAGGGCAGTCTAGCAGAACAACACTGAAGGGGTTTAAATCCTCAAGTATTCTAAACAGAATACAACTAAATGATTTTCAGACAAGCACAAAAATAGAGGCTTTGAGGGAAGAAATTAGTTTGATGGTGGAGAGGGATGGTTCTGCCAAAGGAATTGTTTTCAGCCAATTCACGTCTTTCTTGGATCTCATAAATTACTCCCTCCATAAGTCTGGCATAAACTGTGTTCAATTAGTAGGGAGCATGTCCATGGCTGCAAGAGATGCTGCAATAAAGAGATTTACTGAGGATCCAGATTGCAAGATTTTTCTCATGAGTTTGAAAGCTGGAGGTGTCGCCCTCAATCTTACAGTGGCATCACATGTTTTCTTGATGGACCCTTGGTGGAACCCAGCTGTGGAGCGTCAAGCACAAGATAGAATTCACCGAATTGGCCAGTGTAAACCAATAAGGATTGTGAGATTTGTTATTGAGAACACAATAGAGGAGAGGATTTTAAAGCTGCAAGAGAAGAAGGAATTAGTATTTGAAGGGACTGTGGGTGGCTCTACAGAGGCTCTAGGAAAATTGACAGAGGCAGACATGAGATTTCTATTTGTGACTTGA
Protein:  
MQLRPRKRTSNPASNEPSDSSDKADDFIQLDDLSDQEIYVPSSDSDQGEVEIFDLNHKPMTATAVSHLAFAPITVSDFAEPSTNRSNAEQQSTEQNEGDYDFYVSSRKKRNNVKRKKKKARSGPLLMWEVWEQEHEKWIDENLTADVDLDQQNAVITETSEASPDLIIPLLRYQKEWLAWALKQEDSATKGGILADEMGMGKTIQAIALVLAKRELLRTIAEPNGSSLTPSSSTDLPMIRGTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGTNRGKNIKQFLDYDFVITTYSIVEAEYRKYMMPPKEKCPYCGKSFYQKKLSVHLKYYCGPDAVKTEKQSKQERKKSKSVFKSDREHTSNYETDMRKGAGKKKSKHNEEDKDLDFEFDDTFAGVEHSLPQGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLTLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDYSSSTQCSNCPHNSVRHFCWWNKYVATPIQQCGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIVSLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTASQRAGSIVNSDKNNDEQVCGICHDPTEEPVVTACAHVFCKACLIDFSASLGQVSCPSCSRLLTVDLTTKADAGGQSSRTTLKGFKSSSILNRIQLNDFQTSTKIEALREEISLMVERDGSAKGIVFSQFTSFLDLINYSLHKSGINCVQLVGSMSMAARDAAIKRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQCKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGGSTEALGKLTEADMRFLFVT